The 2006 San Diego City Council election occurred on November 7, 2006. The primary election was held on June 6, 2006. Four of the eight seats of the San DiegoCity Council were contested. All four incumbent council members stood for reelection.
Municipal elections in California are officially non-partisan, although most candidates do identify a party preference. A two-round system was used for the election, starting with a primary in June followed by a runoff in November between the top-two candidates if no candidate received a majority of the votes in the first round. Since each incumbent was reelected with a majority in the June primary, there were no city council runoffs in the November general election.