APOBEC3A

APOBEC3A
Available structures
PDBHuman UniProt search: PDBe RCSB
Identifiers
AliasesAPOBEC3A, A3A, ARP3, PHRBN, bK150C2.1, apolipoprotein B mRNA editing enzyme catalytic subunit 3A
External IDsOMIM: 607109; HomoloGene: 82288; GeneCards: APOBEC3A; OMA:APOBEC3A - orthologs
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

NM_145699
NM_001270406

n/a

RefSeq (protein)

NP_001257335
NP_663745

n/a

Location (UCSC)Chr 22: 38.95 – 38.99 Mbn/a
PubMed search[2]n/a
Wikidata
View/Edit Human

Apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A, also known as APOBEC3A, or A3A is a gene of the APOBEC3 family found in humans, non-human primates, and some other mammals.[3] It is a single-domain DNA cytidine deaminase with antiviral effects. While other members of the family such as APOBEC3G are believed to act by editing ssDNA by removing an amino group from cytosine in DNA, introducing a cytosine to uracil change which can ultimately lead to a cytosine to thymine mutation, one study suggests that APOBEC3A can inhibit parvoviruses by another mechanism.[4] The cellular function of APOBEC3A is likely to be the destruction of foreign DNA through extensive deamination of cytosine.Stenglein MD, Burns MB, Li M, Lengyel J, Harris RS (February 2010). "APOBEC3 proteins mediate the clearance of foreign DNA from human cells". Nature Structural & Molecular Biology. 17 (2): 222–9. doi:10.1038/nsmb.1744. PMC 2921484. PMID 20062055.

This gene is a member of the polynucleotide cytosine deaminase gene family. It is one of seven related genes or pseudogenes found in a cluster, thought to result from gene duplication, on chromosome 22. Members of the cluster encode proteins that are structurally and functionally related to the C to U RNA-editing cytidine deaminase APOBEC1. The APOBEC3 family of DNA editing enzymes are thought to be part of the innate immune system by restricting retroviruses, mobile genetic elements like retrotransposons and endogenous retroviruses. In addition, APOBEC3A is an important restrictive factor for HIV-1 and other retroviruses such as murine leukemia virus,[5][6]

  1. ^ a b c ENSG00000262156 GRCh38: Ensembl release 89: ENSG00000128383, ENSG00000262156Ensembl, May 2017
  2. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  3. ^ "Entrez Gene: APOBEC3A apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A".
  4. ^ Narvaiza I, Linfesty DC, Greener BN, Hakata Y, Pintel DJ, Logue E, et al. (May 2009). Jung JU (ed.). "Deaminase-independent inhibition of parvoviruses by the APOBEC3A cytidine deaminase". PLOS Pathogens. 5 (5): e1000439. doi:10.1371/journal.ppat.1000439. PMC 2678267. PMID 19461882.
  5. ^ Jaguva Vasudevan AA, Becker D, Luedde T, Gohlke H, Münk C (March 2021). "Foamy Viruses, Bet, and APOBEC3 Restriction". Viruses. 13 (3): 504. doi:10.3390/v13030504. PMC 8003144. PMID 33803830.
  6. ^ Stupfler B, Verriez C, Gallois-Montbrun S, Marquet R, Paillart JC (April 2021). "Degradation-Independent Inhibition of APOBEC3G by the HIV-1 Vif Protein". Viruses. 13 (4): 617. doi:10.3390/v13040617. PMC 8066197. PMID 33916704.