Ideal chain

An ideal chain (or freely-jointed chain) is the simplest model in polymer chemistry to describe polymers, such as nucleic acids and proteins. It assumes that the monomers in a polymer are located at the steps of a hypothetical random walker that does not remember its previous steps. By neglecting interactions among monomers, this model assumes that two (or more) monomers can occupy the same location. Although it is simple, its generality gives insight about the physics of polymers.

In this model, monomers are rigid rods of a fixed length l, and their orientation is completely independent of the orientations and positions of neighbouring monomers. In some cases, the monomer has a physical interpretation, such as an amino acid in a polypeptide. In other cases, a monomer is simply a segment of the polymer that can be modeled as behaving as a discrete, freely jointed unit. If so, l is the Kuhn length. For example, chromatin is modeled as a polymer in which each monomer is a segment approximately 14–46 kbp in length.[1]

  1. ^ Rippe, Karsten (2001). "Making contacts on a nucleic acid polymer". Trends in Biochemical Sciences. 26 (12): 733–740. doi:10.1016/S0968-0004(01)01978-8.