Lysobacter

Lysobacter
Attachment of Lysobacter enzymogenes strain C3 to fungal hyphae of Magnaporthe oryzae (also known as rice blast and gray leaf spot of turfgrass)
Scientific classification
Domain:
Bacteria
Phylum:
Pseudomonadota
Class:
Gammaproteobacteria
Order:
Xanthomonadales
Family:
Xanthomonadaceae
Genus:
Lysobacter

The genus Lysobacter belongs to the family Xanthomonadaceae within the Gammaproteobacteria and includes at least 46 named species, including: Lysobacter enzymogenes, L. antibioticus, L. gummosus, L. brunescens, L. defluvii, L. niabensis, L. niastensis, L. daejeonensis, L. yangpyeongensis, L. koreensis, L. concretionis, L. spongiicola, and L. capsici.[1][2][3][4][5][6][7][8] Lysobacter spp. were originally grouped with myxobacteria because they shared the distinctive trait of gliding motility, but they uniquely display a number of traits that distinguish them from other taxonomically and ecologically related microbes including high genomic G+C content (typically ranging between 65 and 72%) and the lack of flagella.[2][9] The feature of gliding motility alone has piqued the interest of many, since the role of gliding bacteria in soil ecology is poorly understood. In addition, while a number of different mechanisms have been proposed for gliding motility among a wide range of bacterial species,[10] the genetic mechanism in Lysobacter remains unknown. Members of the Lysobacter group have gained broad interest for production of extracellular enzymes.[11][12][13][14][15][16][17][18][19][20][21][22][23] The group is also regarded as a rich source for production of novel antibiotics, such as β-lactams containing substituted side chains, macrocyclic lactams and macrocyclic peptide or depsipeptide antibiotics like the katanosins.[24][25][26][27][28][29][30][31][32][33][34][35]

  1. ^ Bae, H. S., W. T. Im, and S. T. Lee. 2005. Lysobacter concretionis sp. nov., isolated from anaerobic granules in an upflow anaerobic sludge blanket reactor. Int J Syst Evol Microbiol 55:1155–61.
  2. ^ a b Christensen, P., and F. Cook. 1978. Lysobacter, a new genus of nonfruiting, gliding bacteria with a high base ratio. International Journal of Systematic Bacteriology 28:367–393.
  3. ^ Lee, J. W., W. T. Im, M. K. Kim, and D. C. Yang. 2006. Lysobacter koreensis sp. nov., isolated from a ginseng field. Int J Syst Evol Microbiol 56:231-5.
  4. ^ Weon, H. Y., B. Y. Kim, Y. K. Baek, S. H. Yoo, S. W. Kwon, E. Stackebrandt, and S. J. Go. 2006. Two novel species, Lysobacter daejeonensis sp. nov. and Lysobacter yangpyeongensis sp. nov., isolated from Korean greenhouse soils. Int J Syst Evol Microbiol 56:947-51.
  5. ^ Weon, H. Y., B. Y. Kim, M. K. Kim, S. H. Yoo, S. W. Kwon, S. J. Go, and E. Stackebrandt. 2007. Lysobacter niabensis sp. nov. and Lysobacter niastensis sp. nov., isolated from greenhouse soils in Korea. Int J Syst Evol Microbiol 57:548-51.
  6. ^ Yassin, A. F., W.-M. Chen, H. Hupfer, C. Siering, R. M. Kroppenstedt, A. B. Arun, W.-A. Lai, F.-T. Shen, P. D. Rekha, and C. C. Young. 2007. Lysobacter defluvii sp. nov., isolated from municipal solid waste. Int J Syst Evol Microbiol 57:1131–1136.
  7. ^ Romanenko, L.A., Uchino, M., Tanaka, N., Frolova, G.M., Mikhailov, V.V., 2008. Lysobacter spongiicola sp. nov., isolated from a deep-sea sponge. International Journal of Systematic and Evolutionary Microbiology 58, 370–374.
  8. ^ Park, J.H., Kim, R., Aslam, Z., Jeon, C.O., Chung, Y.R., 2008. Lysobacter capsici sp. nov., with antimicrobial activity, isolated from the rhizosphere of pepper, and emended description of the genus Lysobacter. International Journal of Systematic and Evolutionary Microbiology 58, 387–392.
  9. ^ Cite error: The named reference Sullivan was invoked but never defined (see the help page).
  10. ^ McBride, M. J. 2001. Bacterial gliding motility: Multiple mechanisms for cell movement over surfaces. Annual Review of Microbiology 55:49–75.
  11. ^ Ahmed, K., S. Chohnan, H. Ohashi, T. Hirata, T. Masaki, and F. Sakiyama. 2003. Purification, bacteriolytic activity, and specificity of β-lytic protease from Lysobacter sp. IB-9374. Journal of Bioscience and Bioengineering 95:27–34.
  12. ^ Allpress, J. D., G. Mountain, and P. C. Gowland. 2002. Production, purification and characterization of an extracellular keratinase from Lysobacter NCIMB 9497. Lett Appl Microbiol 34:337-42.
  13. ^ Au, S., K. L. Roy, and R. G. von Tigerstrom. 1991. Nucleotide sequence and characterization of the gene for secreted alkaline phosphatase from Lysobacter enzymogenes. J Bacteriol 173:4551-7.
  14. ^ Chohnan, S., J. Nonaka, K. Teramoto, K. Taniguchi, Y. Kameda, H. Tamura, Y. Kurusu, S. Norioka, T. Masaki, and F. Sakiyama. 2002. Lysobacter strain with high lysyl endopeptidase production. FEMS Microbiol Lett 213:13–20.
  15. ^ Chohnan, S., K. Shiraki, K. Yokota, M. Ohshima, N. Kuroiwa, K. Ahmed, T. Masaki, and F. Sakiyama. 2004. A second lysine-specific serine protease from Lysobacter sp. strain IB-9374. J Bacteriol 186:5093-100.
  16. ^ Epstein, D. M., and P. C. Wensink. 1988. The α-lytic protease gene of Lysobacter enzymogenes. The nucleotide sequence predicts a large prepropeptide with homology to propeptides of other chymotrypsin-like enzymes. J Biol Chem 263:16586-90.
  17. ^ Ogura, J., A. Toyoda, T. Kurosawa, A. L. Chong, S. Chohnan, and T. Masaki. 2006. Purification, characterization, and gene analysis of cellulase (Cel8A) from Lysobacter sp. IB-9374. Biosci Biotechnol Biochem 70:2420-8.
  18. ^ Palumbo, J. D., R. F. Sullivan, and D. Y. Kobayashi. 2003. Molecular characterization and expression in Escherichia coli of three β-1,3-Glucanase genes from Lysobacter enzymogenes Strain N4-7. J. Bacteriol. 185:4362–4370.
  19. ^ Cite error: The named reference Palumbo was invoked but never defined (see the help page).
  20. ^ von Tigerstrom, R. G. 1980. Extracellular nucleases of Lysobacter enzymogenes: production of the enzymes and purification and characterization of an endonuclease. Can J Microbiol 26:1029–37.
  21. ^ von Tigerstrom, R. G. 1984. Production of two phosphatases by Lysobacter enzymogenes and purification and characterization of the extracellular enzyme. Appl Environ Microbiol 47:693-8.
  22. ^ von Tigerstrom, R. G., and S. Stelmaschuk. 1987. Comparison of the phosphatases of Lysobacter enzymogenes with those of related bacteria. J Gen Microbiol 133:3121-7.
  23. ^ Wright, D. S., L. D. Graham, and P. A. Jennings. 1998. Cloning of a Lysobacter enzymogenes gene that encodes an arginyl endopeptidase (endoproteinase Arg-C). Biochim Biophys Acta 1443:369-74.
  24. ^ Bonner, D. P., J. O'Sullivan, S. K. Tanaka, J. M. Clark, and R. R. Whitney. 1988. Lysobactin, a novel antibacterial agent produced by Lysobacter sp. II. Biological properties. J Antibiot (Tokyo) 41:1745–51.
  25. ^ Harada, S., S. Tsubotani, H. Ono, and H. Okazaki. 1984. Cephabacins, new cephem antibiotics of bacterial origin. II. Isolation and characterization. J Antibiot (Tokyo) 37:1536–45.
  26. ^ Hashizume, H., S. Hattori, M. Igarashi, and Y. Akamatsu. 2004. Tripropeptin E, a new tripropeptin group antibiotic produced by Lysobacter sp. BMK333-48F3. J Antibiot (Tokyo) 57:394-9.
  27. ^ Hashizume, H., S. Hirosawa, R. Sawa, Y. Muraoka, D. Ikeda, H. Naganawa, and M. Igarashi. 2004. Tripropeptins, novel antimicrobial agents produced by Lysobacter sp. J Antibiot (Tokyo) 57:52-8.
  28. ^ Hashizume, H., M. Igarashi, S. Hattori, M. Hori, M. Hamada, and T. Takeuchi. 2001. Tripropeptins, novel antimicrobial agents produced by Lysobacter sp. I. Taxonomy, isolation and biological activities. J Antibiot (Tokyo) 54:1054-9.
  29. ^ Kato, A., S. Nakaya, N. Kokubo, Y. Aiba, Y. Ohashi, H. Hirata, K. Fujii, and K. Harada. 1998. A new anti-MRSA antibiotic complex, WAP-8294A. I. Taxonomy, isolation and biological activities. J Antibiot (Tokyo) 51:929-35.
  30. ^ Kimura, H., M. Izawa, and Y. Sumino. 1996. Molecular analysis of the gene cluster involved in cephalosporin biosynthesis from Lysobacter lactamgenus YK90. Applied Microbiology and Biotechnology 44:589–596.
  31. ^ Meyers, E., R. Cooper, L. Dean, J. H. Johnson, D. S. Slusarchyk, W. H. Trejo, and P. D. Singh. 1985. Catacandins, novel anticandidal antibiotics of bacterial origin. J Antibiot (Tokyo) 38:1642-8.
  32. ^ Nakayama, T., Y. Homma, Y. Hashidoko, J. Mizutani, and S. Tahara. 1999. Possible role of xanthobaccins produced by Stenotrophomonas sp strain SB-K88 in suppression of sugar beet damping-off disease. Applied and Environmental Microbiology 65:4334–4339.
  33. ^ O'Sullivan, J., J. E. McCullough, A. A. Tymiak, D. R. Kirsch, W. H. Trejo, and P. A. Principe. 1988. Lysobactin, a novel antibacterial agent produced by Lysobacter sp. I. Taxonomy, isolation and partial characterization. J Antibiot (Tokyo) 41:1740-4.
  34. ^ Ono, H., Y. Nozaki, N. Katayama, and H. Okazaki. 1984. Cephabacins, new cephem antibiotics of bacterial origin. I. Discovery and taxonomy of the producing organisms and fermentation. J Antibiot (Tokyo) 37:1528–35.
  35. ^ Panthee, S; Hamamoto, H; Paudel, A; Sekimizu, K (November 2016). "Lysobacter species: a potential source of novel antibiotics". Archives of Microbiology. 198 (9): 839–45. doi:10.1007/s00203-016-1278-5. PMID 27541998.