myExperiment is a social web site for researchers sharing research objects such as scientific workflows .[ 2] [ 3] [ 4] [ 5]
The myExperiment website was launched in November 2007 and contains a significant collection of scientific workflows for a variety of workflow systems, most notably Taverna , but also other tools such as Bioclipse . myExperiment has a REST API and is based on an open source Ruby on Rails codebase. It supports Linked data and had a SPARQL Endpoint, with an interactive tutorial.[ 6] [ 7] [ 8] [ 9]
^ Goble, C. A. ; Bhagat, J.; Aleksejevs, S.; Cruickshank, D.; Michaelides, D.; Newman, D.; Borkum, M.; Bechhofer, S.; Roos, M.; Li, P.; De Roure, D. (2010). "MyExperiment: A repository and social network for the sharing of bioinformatics workflows" . Nucleic Acids Research . 38 (Web Server issue): W677–W682. doi :10.1093/nar/gkq429 . PMC 2896080 . PMID 20501605 .
^ Bechhofer, S.; Buchan, I.; De Roure, D. ; Missier, P.; Ainsworth, J.; Bhagat, J.; Couch, P.; Cruickshank, D.; Delderfield, M.; Dunlop, I.; Gamble, M.; Michaelides, D.; Owen, S.; Newman, D.; Sufi, S.; Goble, C. (2011). "Why linked data is not enough for scientists" (PDF) . Future Generation Computer Systems . 29 (2): 599. doi :10.1016/j.future.2011.08.004 . S2CID 16783450 .
^ De Roure, D. ; Goble, C. ; Stevens, R. (2009). "The design and realisation of the myExperiment Virtual Research Environment for social sharing of workflows" (PDF) . Future Generation Computer Systems . 25 (5): 561–567. doi :10.1016/j.future.2008.06.010 .
^ Roure, D. D. ; Goble, C. ; Bhagat, J.; Cruickshank, D.; Goderis, A.; Michaelides, D.; Newman, D. (2008). "MyExperiment: Defining the Social Virtual Research Environment". 2008 IEEE Fourth International Conference on e Science (PDF) . pp. 182–189. doi :10.1109/eScience.2008.86 . ISBN 978-1-4244-3380-3 . S2CID 11104419 .
^ De Roure, D. ; Goble, C. (2009). "Software Design for Empowering Scientists" (PDF) . IEEE Software . 26 : 88–95. doi :10.1109/MS.2009.22 . S2CID 33191938 .
^ "How To SPARQL" . myExperiment RDF . Archived from the original on 26 March 2019.
^ Gewin, Virginia (2008). "The new networking nexus: A crop of websites is making networking among scientists easier than ever". Nature . 451 (7181): 1024–1025. doi :10.1038/nj7181-1024a . PMID 18363200 .
^ Hendler, J. (2008). "Reinventing Academic Publishing, Part 3" . IEEE Intelligent Systems . 23 : 2–3. doi :10.1109/MIS.2008.12 .
^ Stein, L. D. (2008). "Towards a cyberinfrastructure for the biological sciences: Progress, visions and challenges". Nature Reviews Genetics . 9 (9): 678–688. doi :10.1038/nrg2414 . PMID 18714290 . S2CID 339653 .