Pseudomonas amygdali

Pseudomonas amygdali
Scientific classification Edit this classification
Domain: Bacteria
Phylum: Pseudomonadota
Class: Gammaproteobacteria
Order: Pseudomonadales
Family: Pseudomonadaceae
Genus: Pseudomonas
Species:
P. amygdali
Binomial name
Pseudomonas amygdali
Psallidas and Panagopoulos 1975
Type strain
ATCC 33614

CCUG 32770
CFBP 3205
CIP 106734
DSM 7298
ICMP 3918
LMG 13184
NCPPB 2607

Pathovars

P. a. pv. aesculi
P. a. pv. amygdali
P. a. pv. ciccaronei
P. a. pv. dendropanacis
P. a. pv. eriobotryae
P. a. pv. glycinea
P. a. pv. hibisci
P. a. pv. lachrymans
P. a. pv. mellea
P. a. pv. mori
P. a. pv. morsprumorum
P. a. pv. myricae
P. a. pv. phaseolicola
P. a. pv. photiniae
P. a. pv. sesami
P. a. pv. tabaci
P. a. pv. ulmi

Pseudomonas amygdali is a Gram-negative plant pathogenic bacterium.[1] It is named after its ability to cause disease on almond (Prunus amygdalus) trees. Different analyses, including 16S rRNA analysis,[2] DNA-DNA hybridization,[3] and MLST[4][5][6][7] clearly placed P. amygdali in the P. syringae group together with the species Pseudomonas ficuserectae and Pseudomonas meliae, and 27 pathovars of Pseudomonas syringae/Pseudomonas savastanoi, constituting a single, well-defined phylogenetic group which should be considered as a single species. This phylogenetic group has not been formally named because of the lack of reliable means to differentiate it phenotypically from closely related species,[3] and it is currently known as either genomospecies 2[3] or phylogroup 3.[4][5][8] When it is formally named, the correct name for this new species should be Pseudomonas amygdali,[3] which takes precedence over all the other names of taxa from this group, including Pseudomonas savastanoi, which is and inadequate and confusing name whose use is not recommended .[3][9]

  1. ^ Smith, Dunez, Lelliot, Phillips and Archer (1988) European Handbook of Plant Disease. Blackwell Scientific Publications.
  2. ^ Anzai; et al. (Jul 2000). "Phylogenetic affiliation of the pseudomonads based on 16S rRNA sequence". Int J Syst Evol Microbiol. 50 (4): 1563–89. doi:10.1099/00207713-50-4-1563. PMID 10939664.
  3. ^ a b c d e Gardan, L.; Shafik, H.; Belouin, S.; Broch, R.; Grimont, F.; Grimont, P. A. D. (1999). "DNA relatedness among the pathovars of Pseudomonas syringae and description of Pseudomonas tremae sp. nov. and Pseudomonas cannabina sp. nov. (ex Sutic and Dowson 1959)". International Journal of Systematic and Evolutionary Microbiology. 49 (2): 469–478. doi:10.1099/00207713-49-2-469. PMID 10319466.
  4. ^ a b Berge, Odile; Monteil, Caroline L.; Bartoli, Claudia; Chandeysson, Charlotte; Guilbaud, Caroline; Sands, David C.; Morris, Cindy E. (2014-09-03). "A User's Guide to a Data Base of the Diversity of Pseudomonas syringae and Its Application to Classifying Strains in This Phylogenetic Complex". PLOS ONE. 9 (9): e105547. Bibcode:2014PLoSO...9j5547B. doi:10.1371/journal.pone.0105547. ISSN 1932-6203. PMC 4153583. PMID 25184292.
  5. ^ a b Hwang, Michael S. H.; Morgan, Robyn L.; Sarkar, Sara F.; Wang, Pauline W.; Guttman, David S. (2005-09-01). "Phylogenetic Characterization of Virulence and Resistance Phenotypes of Pseudomonas syringae". Applied and Environmental Microbiology. 71 (9): 5182–5191. Bibcode:2005ApEnM..71.5182H. doi:10.1128/AEM.71.9.5182-5191.2005. ISSN 0099-2240. PMC 1214625. PMID 16151103.
  6. ^ Bull, Carolee T.; Clarke, Christopher R.; Cai, Rongman; Vinatzer, Boris A.; Jardini, Teresa M.; Koike, Steven T. (2011-02-15). "Multilocus Sequence Typing of Pseudomonas syringae Sensu Lato Confirms Previously Described Genomospecies and Permits Rapid Identification of P. syringae pv. coriandricola and P. syringae pv. apii Causing Bacterial Leaf Spot on Parsley". Phytopathology. 101 (7): 847–858. doi:10.1094/PHYTO-11-10-0318. ISSN 0031-949X. PMID 21323469.
  7. ^ Parkinson, N.; Bryant, R.; Bew, J.; Elphinstone, J. (2010). "Rapid phylogenetic identification of members of the Pseudomonas syringae species complex using the rpoD locus". Plant Pathology. 60 (2): 338–344. doi:10.1111/j.1365-3059.2010.02366.x.
  8. ^ Baltrus, David A.; McCann, Honour C.; Guttman, David S. (2017-01-01). "Evolution, genomics and epidemiology of Pseudomonas syringae". Molecular Plant Pathology. 18 (1): 152–168. doi:10.1111/mpp.12506. ISSN 1364-3703. PMC 6638251. PMID 27798954.
  9. ^ Young, J. M. (September 2010). "Taxonomy of Pseudomonas syringae". Journal of Plant Pathology. 92 (1sup): S1.5–S1.14.