Stromal cell-derived factor 1

CXCL12
Available structures
PDBOrtholog search: PDBe RCSB
Identifiers
AliasesCXCL12, IRH, PBSF, SCYB12, SDF1, TLSF, TPAR1, C-X-C motif chemokine ligand 12
External IDsOMIM: 600835; MGI: 103556; HomoloGene: 128606; GeneCards: CXCL12; OMA:CXCL12 - orthologs
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

NM_199168
NM_000609
NM_001033886
NM_001178134
NM_001277990

NM_001012477
NM_013655
NM_021704

RefSeq (protein)

NP_000600
NP_001029058
NP_001171605
NP_001264919
NP_954637

NP_001012495
NP_038683
NP_068350

Location (UCSC)Chr 10: 44.37 – 44.39 MbChr 6: 117.15 – 117.16 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

The stromal cell-derived factor 1 (SDF-1), also known as C-X-C motif chemokine 12 (CXCL12), is a chemokine protein that in humans is encoded by the CXCL12 gene on chromosome 10.[5] It is ubiquitously expressed in many tissues and cell types.[6] Stromal cell-derived factors 1-alpha and 1-beta are small cytokines that belong to the chemokine family, members of which activate leukocytes and are often induced by proinflammatory stimuli such as lipopolysaccharide, TNF, or IL1. The chemokines are characterized by the presence of 4 conserved cysteines that form 2 disulfide bonds. They can be classified into 2 subfamilies. In the CC subfamily, the cysteine residues are adjacent to each other. In the CXC subfamily, they are separated by an intervening amino acid. The SDF1 proteins belong to the latter group.[5] CXCL12 signaling has been observed in several cancers.[7][8] The CXCL12 gene also contains one of 27 SNPs associated with increased risk of coronary artery disease.[9]

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000107562Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000061353Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ a b Cite error: The named reference entrez was invoked but never defined (see the help page).
  6. ^ "BioGPS - your Gene Portal System". biogps.org. Retrieved 11 October 2016.
  7. ^ Cite error: The named reference Guo_2016 was invoked but never defined (see the help page).
  8. ^ Cite error: The named reference Sorrentino_2016 was invoked but never defined (see the help page).
  9. ^ Cite error: The named reference Mega_2015 was invoked but never defined (see the help page).