Calcium-binding protein 1

CABP1
Available structures
PDBOrtholog search: PDBe RCSB
Identifiers
AliasesCABP1, CALBRAIN, HCALB_BR, calcium binding protein 1
External IDsOMIM: 605563; MGI: 1352750; HomoloGene: 128292; GeneCards: CABP1; OMA:CABP1 - orthologs
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

NM_031205
NM_001033677
NM_004276

NM_013879
NM_001310712
NM_001310715

RefSeq (protein)

NP_001028849
NP_004267
NP_112482

NP_001297641
NP_001297644
NP_038907

Location (UCSC)Chr 12: 120.64 – 120.67 MbChr 5: 115.31 – 115.33 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Calcium binding protein 1 is a protein that in humans is encoded by the CABP1 gene.[5] Calcium-binding protein 1 is a calcium-binding protein[6] discovered in 1999.[7] It has two EF hand motifs and is expressed in neuronal cells in such areas as hippocampus, habenular nucleus of the epithalamus, Purkinje cell layer of the cerebellum, and the amacrine cells and cone bipolar cells of the retina.

Calcium-binding protein 1 which is a neuron-specific member of the calmodulin (CaM) superfamily which modulates Ca2+-dependent activity of inositol trisphosphate receptors (InsP3RS).[8] L-CaBP1 is also associated with the cytoskeleton structures. But the S-CaBP1 is situated in or near the plasma membrane. In brain, CaBp1 is found in the cerebral cortex and hippocampus and in the protein, Cabp1 is found in cone bipolar and amacrine cells. We can also express that CaBP1 may regulate Ca2+ dependent activity of InSP3Rs by promoting structural contacts between suppressor and core domains but has no effect on INsP3 binding to the receptor. CaBP1 contains four EF-hands in two separate domains namely, EF1 and Ef2 is contained in N-domain whereas Ef3 and EF4 is contained in c domain to which Ca2+ binds.[9] Calcium-binding protein 1 (CaBP1) is placed in the lumen of the endoplasmic reticulum.it is relocated outside cells during apoptosis and involved in the phagocytosis of apoptotic cells.[10] CaBP1[9] and CaM.[11][12] lobes fold independently. CaBP1-CaM chimeras based on exchange of three elements these are N-lobe, C-lobe and inter lobe linker. Expression of CaBP1 helps to block Ca2+-dependent facilitation of P/Q-type Ca2+ current which is markedly reduced facilitation of synaptic transmission.

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000157782Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000029544Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ "Entrez Gene: Calcium binding protein 1".
  6. ^ McCue HV, Haynes LP, Burgoyne RD (August 2010). "The diversity of calcium sensor proteins in the regulation of neuronal function". Cold Spring Harbor Perspectives in Biology. 2 (8): a004085. doi:10.1101/cshperspect.a004085. PMC 2908765. PMID 20668007.
  7. ^ Yamaguchi K, Yamaguchi F, Miyamoto O, Sugimoto K, Konishi R, Hatase O, Tokuda M (February 1999). "Calbrain, a novel two EF-hand calcium-binding protein that suppresses Ca2+/calmodulin-dependent protein kinase II activity in the brain". The Journal of Biological Chemistry. 274 (6): 3610–6. doi:10.1074/jbc.274.6.3610. PMID 9920909.
  8. ^ Haeseleer F, Sokal I, Verlinde CL, Erdjument-Bromage H, Tempst P, Pronin AN, Benovic JL, Fariss RN, Palczewski K (2000). "Five members of a novel Ca2+-binding protein (CABP) subfamily with similarity to calmodulin". The Journal of Biological Chemistry. 275 (2): 1247–60. doi:10.1074/jbc.275.2.1247. PMC 1364469. PMID 10625670.
  9. ^ a b Li C, Chan J, Haeseleer F, Mikoshiba K, Palczewski K, Ikura M, Ames JB (January 2009). "Structural insights into Ca2+-dependent regulation of inositol 1,4,5-trisphosphate receptors by CaBP1". The Journal of Biological Chemistry. 284 (4): 2472–81. doi:10.1074/jbc.M806513200. PMC 2629100. PMID 19008222.
  10. ^ "Gene Dmel\CaBP1". FlyBase.
  11. ^ Masino L, Martin SR, Bayley PM (2000). "Ligand binding and thermodynamic stability of a multidomain protein, calmodulin". Protein Science. 9 (8): 1519–29. doi:10.1110/ps.9.8.1519. PMC 2144730. PMID 10975573.
  12. ^ Tsalkova TN, Privalov PL (1985). "Thermodynamic study of domain organization in troponin C and calmodulin". Journal of Molecular Biology. 181 (4): 533–44. doi:10.1016/0022-2836(85)90425-5. PMID 3999139.