Kalirin

KALRN
Available structures
PDBOrtholog search: PDBe RCSB
Identifiers
AliasesKALRN, ARHGEF24, CHD5, CHDS5, DUET, DUO, HAPIP, TRAD, kalirin, RhoGEF kinase, kalirin RhoGEF kinase
External IDsOMIM: 604605; MGI: 2685385; HomoloGene: 57160; GeneCards: KALRN; OMA:KALRN - orthologs
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

NM_001164268
NM_177357

RefSeq (protein)

NP_001157740
NP_796331

Location (UCSC)Chr 3: 124.03 – 124.73 MbChr 16: 33.79 – 34.39 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Kalirin, also known as Huntingtin-associated protein-interacting protein (HAPIP), protein duo (DUO), or serine/threonine-protein kinase with Dbl- and pleckstrin homology domain, is a protein that in humans is encoded by the KALRN gene.[5][6] Kalirin was first identified in 1997 as a protein interacting with huntingtin-associated protein 1.[5] Is also known to play an important role in nerve growth and axonal development.[7]

Kalirin is a member of the Dbl family of proteins and is a Rho guanine nucleotide exchange factor.

It is named after the multiple-handed Hindu goddess Kali for its ability to interact with numerous other proteins. Kalirin's other name, DUO, comes from the fact that it is 98% identical to rat DUO protein and 80.6% identical to a human protein named TRIO. Unlike TRIO, which is expressed in numerous tissues, Kalirin isoforms are mainly found in the brain.

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000160145Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000061751Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ a b Cite error: The named reference pmid9285789 was invoked but never defined (see the help page).
  6. ^ Cite error: The named reference pmid10023074 was invoked but never defined (see the help page).
  7. ^ Cite error: The named reference pmid15923627 was invoked but never defined (see the help page).