Lachnospiraceae

Lachnospiraceae
Scientific classification
Domain:	Bacteria
Phylum:	Bacillota
Class:	Clostridia
Order:	Eubacteriales
Family:	Lachnospiraceae; Rainey 2010
Genera
	Abyssivirga; Acetatifactor; Acetitomaculum; Agathobacter; Anaerobium; Anaerobutyricum; Anaerocolumna; Anaerosacchariphilus; Anaerostipes; Anaerotaenia; Anaerotignum; Blautia; Butyrivibrio; Catenibacillus; Catonella; Cellulosilyticum; Coprococcus; Cuneatibacter; Dorea; Eisenbergiella; Enterocloster; Extibacter; Faecalicatena; Faecalimonas; Falcatimonas; Frisingicoccus; Fusicatenibacter; Herbinix; Hespellia; Howardella; Johnsonella; Kineothrix; Lachnoanaerobaculum; Lachnobacterium; Lachnoclostridium; Lachnospira; Lachnotalea; Lacrimispora; Marvinbryantia; Mediterraneibacter; Merdimonas; Mobilisporobacter; Mobilitalea; Moryella; Muricomes; Murimonas; Natranaerovirga; Oribacterium; Parasporobacterium; Pseudobutyrivibrio; Robinsoniella; Roseburia; Schaedlerella; Sellimonas; Shuttleworthia; Sporobacterium; Sporofaciens; Stomatobaculum; Syntrophococcus

The Lachnospiraceae are a family of obligately anaerobic, variably spore-forming bacteria in the order Eubacteriales that ferment diverse plant polysaccharides^[11] to short-chain fatty acids (butyrate, acetate) and alcohols (ethanol). These bacteria are among the most abundant taxa in the rumen^[12] and the human gut microbiota.^[3]^[13]^[14]^[15] Members of this family may protect against colon cancer in humans by producing butyric acid.^[16]^[17] Lachnospiraceae have been found to contribute to diabetes in genetically susceptible (ob/ob) germ-free mice.^[18]

^ LPSN lpsn.dsmz.de
^ "Abyssivirga". www.uniprot.org.
^ ^a ^b ^c ^d ^e ^f ^g ^h ⁱ ^j ^k ^l ^m ⁿ ^o eol
^ "Agathobacter". www.uniprot.org.
^ "Cuneatibacter". www.uniprot.org.
^ Parker, Charles Thomas; Garrity, George M (1 January 2003). Parker, Charles Thomas; Garrity, George M (eds.). "Taxonomic Abstract for the genera". The NamesforLife Abstracts. doi:10.1601/tx.25197 (inactive 1 November 2024).{{cite journal}}: CS1 maint: DOI inactive as of November 2024 (link)
^ Parker, Charles Thomas; Garrity, George M (2017). Parker, Charles Thomas; Garrity, George M (eds.). "Nomenclature Abstract for Faecalicatena Sakamoto et al. 2016". The NamesforLife Abstracts. doi:10.1601/nm.29879 (inactive 1 November 2024).{{cite journal}}: CS1 maint: DOI inactive as of November 2024 (link)
^ Parker, Charles Thomas; Garrity, George M (2017). Parker, Charles Thomas; Garrity, George M (eds.). "Nomenclature Abstract for Faecalimonas Sakamoto et al. 2016". The NamesforLife Abstracts. doi:10.1601/nm.29877 (inactive 1 November 2024).{{cite journal}}: CS1 maint: DOI inactive as of November 2024 (link)
^ UniProt
^ "Family - L". List of Prokaryotic Names with Standing in Nomenclature. Retrieved 30 March 2021.
^ Boutard, M; Cerisy, T (13 November 2014). "Functional Diversity of Carbohydrate-Active Enzymes Enabling a Bacterium to Ferment Plant Biomass". PLOS Genetics. 10 (11): e1004773. doi:10.1371/journal.pgen.1004773. PMC 4230839. PMID 25393313.
^ Seshadri, R; Leahy, SC (19 March 2018). "Cultivation and sequencing of rumen microbiome members from the Hungate1000 Collection". Nature Biotechnology. 36 (4): 359–367. doi:10.1038/nbt.4110. PMC 6118326. PMID 29553575.
^ Phyllis Kanki; Darrell Jay Grimes, eds. (2013). Infectious diseases selected entries from the Encyclopedia of sustainability science and technology. New York: Springer. ISBN 978-1-4614-5719-0.
^ UniProt
^ Paul De Vos; et al., eds. (2009). Bergey's manual of systematic bacteriology (2nd ed.). Dordrecht: Springer. ISBN 978-0-387-68489-5.
^ Meehan, C. J.; Beiko, R. G. (12 March 2014). "A Phylogenomic View of Ecological Specialization in the Lachnospiraceae, a Family of Digestive Tract-Associated Bacteria". Genome Biology and Evolution. 6 (3): 703–713. doi:10.1093/gbe/evu050. PMC 3971600. PMID 24625961.
^ Xia, Li C.; Liu, Gang; Gao, Yingxin; Li, Xiaoxin; Pan, Hongfei; Ai, Dongmei (2019). "Identifying Gut Microbiota Associated With Colorectal Cancer Using a Zero-Inflated Lognormal Model". Frontiers in Microbiology. 10: 826. doi:10.3389/fmicb.2019.00826. ISSN 1664-302X. PMC 6491826. PMID 31068913.
^ Kameyama, Keishi; Itoh, Kikuji (2014). "Intestinal Colonization by a Lachnospiraceae Bacterium Contributes to the Development of Diabetes in Obese Mice". Microbes and Environments. 29 (4): 427–430. doi:10.1264/jsme2.ME14054. ISSN 1342-6311. PMC 4262368. PMID 25283478.

[1] LPSN lpsn.dsmz.de

[2] "Abyssivirga". www.uniprot.org.

[eol-3] ^ ^a ^b ^c ^d ^e ^f ^g ^h ⁱ ^j ^k ^l ^m ⁿ ^o eol

[4] "Agathobacter". www.uniprot.org.

[5] "Cuneatibacter". www.uniprot.org.

[6] Parker, Charles Thomas; Garrity, George M (1 January 2003). Parker, Charles Thomas; Garrity, George M (eds.). "Taxonomic Abstract for the genera". The NamesforLife Abstracts. doi:10.1601/tx.25197 (inactive 1 November 2024).{{cite journal}}: CS1 maint: DOI inactive as of November 2024 (link)

[7] Parker, Charles Thomas; Garrity, George M (2017). Parker, Charles Thomas; Garrity, George M (eds.). "Nomenclature Abstract for Faecalicatena Sakamoto et al. 2016". The NamesforLife Abstracts. doi:10.1601/nm.29879 (inactive 1 November 2024).{{cite journal}}: CS1 maint: DOI inactive as of November 2024 (link)

[8] Parker, Charles Thomas; Garrity, George M (2017). Parker, Charles Thomas; Garrity, George M (eds.). "Nomenclature Abstract for Faecalimonas Sakamoto et al. 2016". The NamesforLife Abstracts. doi:10.1601/nm.29877 (inactive 1 November 2024).{{cite journal}}: CS1 maint: DOI inactive as of November 2024 (link)

[9] UniProt

[10] "Family - L". List of Prokaryotic Names with Standing in Nomenclature. Retrieved 30 March 2021.

[11] Boutard, M; Cerisy, T (13 November 2014). "Functional Diversity of Carbohydrate-Active Enzymes Enabling a Bacterium to Ferment Plant Biomass". PLOS Genetics. 10 (11): e1004773. doi:10.1371/journal.pgen.1004773. PMC 4230839. PMID 25393313.

[12] Seshadri, R; Leahy, SC (19 March 2018). "Cultivation and sequencing of rumen microbiome members from the Hungate1000 Collection". Nature Biotechnology. 36 (4): 359–367. doi:10.1038/nbt.4110. PMC 6118326. PMID 29553575.

[13] Phyllis Kanki; Darrell Jay Grimes, eds. (2013). Infectious diseases selected entries from the Encyclopedia of sustainability science and technology. New York: Springer. ISBN 978-1-4614-5719-0.

[14] UniProt

[Bergey-15] Paul De Vos; et al., eds. (2009). Bergey's manual of systematic bacteriology (2nd ed.). Dordrecht: Springer. ISBN 978-0-387-68489-5.

[16] Meehan, C. J.; Beiko, R. G. (12 March 2014). "A Phylogenomic View of Ecological Specialization in the Lachnospiraceae, a Family of Digestive Tract-Associated Bacteria". Genome Biology and Evolution. 6 (3): 703–713. doi:10.1093/gbe/evu050. PMC 3971600. PMID 24625961.

[17] Xia, Li C.; Liu, Gang; Gao, Yingxin; Li, Xiaoxin; Pan, Hongfei; Ai, Dongmei (2019). "Identifying Gut Microbiota Associated With Colorectal Cancer Using a Zero-Inflated Lognormal Model". Frontiers in Microbiology. 10: 826. doi:10.3389/fmicb.2019.00826. ISSN 1664-302X. PMC 6491826. PMID 31068913.

[KameyamaItoh2014-18] Kameyama, Keishi; Itoh, Kikuji (2014). "Intestinal Colonization by a Lachnospiraceae Bacterium Contributes to the Development of Diabetes in Obese Mice". Microbes and Environments. 29 (4): 427–430. doi:10.1264/jsme2.ME14054. ISSN 1342-6311. PMC 4262368. PMID 25283478.

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