Tribe of legumes
The tribe Sophoreae is one of the subdivisions of the plant family Fabaceae . Traditionally this tribe has been used as a wastebasket taxon to accommodate genera of Faboideae which exhibit actinomorphic , rather than zygomorphic floral symmetry and/or incompletely differentiated petals and free stamens.[ 2] [ 3] [ 4] Various morphological[ 5] [ 6] [ 7] [ 8] and molecular [ 9] [ 10] [ 11] [ 12] [ 13] analyses indicated that Sophoreae as traditionally circumscribed was polyphyletic .[ 14] This led to a re-circumscription of Sophoreae, which resulted in the transfer of many genera to other tribes (Amburaneae , Angylocalyceae , Baphieae , Camoensieae , the Cladrastis clade , Exostyleae , Leptolobieae , Ormosieae , Podalyrieae , and the Vataireoids ).[ 2] This also necessitated the inclusion of two former tribes, Euchresteae and Thermopsideae, in the new definition of Sophoreae.[ 2] [ 15] [ 16] [ 17] [ 18] Tribe Sophoreae, as currently circumscribed, consistently forms a monophyletic clade in molecular phylogenetic analyses .[ 2] [ 12] [ 17] [ 19] [ 20] [ 21] [ 22] The Sophoreae arose 40.8 ± 2.4 million years ago (in the Eocene ).[ 8] [ 23]
Description of morphological synapomorphies has yet to be undertaken, but members of this tribe can be distinguished by the relatively simple flowers, unspecialized pinnate leaves , accumulation of quinolizidine alkaloids,[ 24] and the presence of free stamens.[ 2] The tribe does have a node-based definition: the crown clade originating from the most recent common ancestor of Bolusanthus speciosus (Bolus) Harms and Sophora davidii (Franch.) Pavol. .[ 23]
^ Wojciechowski MF (2013). "Towards a new classification of Leguminosae: Naming clades using non-Linnaean phylogenetic nomenclature" . S Afr J Bot . 89 : 85–93. doi :10.1016/j.sajb.2013.06.017 .
^ a b c d e f g Cardoso D, Pennington RT, de Queiroz LP, Boatwright JS, Van Wyk B-E, Wojciechowski MF, Lavin M (2013). "Reconstructing the deep-branching relationships of the papilionoid legumes" . S Afr J Bot . 89 : 58–75. doi :10.1016/j.sajb.2013.05.001 . hdl :10566/3193 .
^ Polhill RM (1981). "Sophoreae" . In Polhill RM, Raven PH (eds.). Advances in Legume Systematics, Parts 1 and 2 . Royal Botanic Gardens, Kew. pp. 213–230. ISBN 9780855212247 . Archived from the original on 2013-12-03. Retrieved 2014-04-18 .
^ Polhill RM (1994). "Classification of the Leguminosae" . In Bisby FA, Buckingham J, Harborne JB (eds.). Phytochemical Dictionary of the Leguminosae, Plants and Their Constituents, Volume 1 . Chapman and Hall/CRC Press, London. pp. xxv–xlvii. ISBN 9780412397707 .
^ Chappill JA (1995). "Cladistic analysis of the Leguminosae: the development of an explicit hypothesis" . In Crisp MD, Doyle JJ (eds.). Advances in Legume Systematics, Part 7: Phylogeny . Royal Botanic Gardens, Kew. pp. 1–9. ISBN 978-0947643799 . Archived from the original on 2014-01-17. Retrieved 2014-04-18 .
^ Herendeen PS (1995). "Phylogenetic relationships of the tribe Swartzieae" . In Crisp MD, Doyle JJ (eds.). Advances in Legume Systematics, Part 7: Phylogeny . Royal Botanic Gardens, Kew. pp. 123–132. ISBN 978-0947643799 . Archived from the original on 2014-01-17. Retrieved 2014-04-18 .
^ Ferguson IK, Schrire BD, Shepperton R (1994). "Pollen morphology of the tribe Sophoreae and relationships between subfamilies Caesalpinioideae and Papilionoideae" . In Ferguson IK, Tucker SC (eds.). Advances in Legume Systematics, Part 6: Structural Botany . Royal Botanic Gardens, Kew. pp. 53–96. ISBN 978-0947643782 .
^ a b Crepet WL, Herendeen PS (1992). "Papilionoid flowers from the early Eocene of southeastern North America" . In Herendeen PS, Dilcher DL (eds.). Advances in Legume Systematics, Part 4: The Fossil Record . Royal Botanic Gardens, Kew. pp. 43–55. ISBN 978-0947643409 . Archived from the original on 2014-02-22. Retrieved 2014-04-18 .
^ Käss E, Wink M (1996). "Molecular evolution of the Leguminosae: Phylogeny of the three subfamilies based on rbcL -sequences". Biochem Syst Ecol . 24 (5): 365–378. Bibcode :1996BioSE..24..365K . doi :10.1016/0305-1978(96)00032-4 .
^ Doyle JJ, Doyle JL, Ballenger JA, Palmer JD (1996). "The distribution and phylogenetic significance of a 50-Kb chloroplast DNA inversion in the flowering plant family Leguminosae" . Mol Phylogenet Evol . 5 (2): 429–438. Bibcode :1996MolPE...5..429D . doi :10.1006/mpev.1996.0038 . PMID 8728401 .
^ Doyle JJ, Doyle JL, Ballenger JA, Dickson EE, Kajita T, Ohashi H (1997). "A phylogeny of the chloroplast gene rbcL in the Leguminosae: taxonomic correlations and insights into the evolution of nodulation" . Am J Bot . 84 (4): 541–554. doi :10.2307/2446030 . JSTOR 2446030 . PMID 21708606 .
^ a b Pennington RT, Lavin M, Ireland H, Klitgaard B, Preston J, Hu J-M (2001). "Phylogenetic relationships of basal papilionoid legumes based upon sequences of the chloroplast trnL intron" . Syst Bot . 55 (5): 818–836. doi :10.1043/0363-6445-26.3.537 (inactive 1 November 2024). JSTOR 3093980 . {{cite journal }}
: CS1 maint: DOI inactive as of November 2024 (link )
^ Pennington RT, Klitgaard BB, Ireland H, Lavin M (2000). "New insights into floral evolution of basal Papilionoideae from molecular phylogenies" . In Herendeen PS, Bruneau A (eds.). Advances in Legume Systematics, Part 9 . Royal Botanic Gardens, Kew. pp. 233–248. ISBN 978-1842460177 . Archived from the original on 2014-01-16. Retrieved 2014-04-18 .
^ Pennington RT, Stirton CH, Schrire BD (2005). "Tribe Sophoreae" . In Lewis G, Schrire B, Mackinder B, Lock M (eds.). Legumes of the World . Royal Botanic Gardens, Kew. pp. 227–249. ISBN 978-1900347808 . Archived from the original on 2014-02-02. Retrieved 2014-04-18 .
^ Lock JM (2005). "Tribe Thermopsideae" . In Lewis G, Schrire B, Mackinder B, Lock M (eds.). Legumes of the World . Royal Botanic Gardens, Kew. pp. 263–265. ISBN 978-1900347808 . Archived from the original on 2014-02-02. Retrieved 2014-04-18 .
^ Ohashi H. (2005). "Tribe Euchresteae" . In Lewis G, Schrire B, Mackinder B, Lock M (eds.). Legumes of the World . Royal Botanic Gardens, Kew. pp. 260–261. ISBN 978-1900347808 . Archived from the original on 2014-02-02. Retrieved 2014-04-18 .
^ a b LPWG [Legume Phylogeny Working Group] (2013). "Legume phylogeny and classification in the 21st century: progress, prospects and lessons for other species-rich clades" (PDF) . Taxon . 62 (2): 217–248. doi :10.12705/622.8 . hdl :10566/3455 .
^ Wang HC, Sun H, Compton JA, Yang JB (2006). "A phylogeny of Thermopsideae (Leguminosae: Papilionoideae) inferred from nuclear ribosomal internal transcribed spacer (ITS) sequences" . Bot J Linn Soc . 151 (3): 365–373. doi :10.1111/j.1095-8339.2006.00512.x .
^ Hu J-M, Lavin M, Wojciechowski MF, Sanderson MJ (2002). "Phylogenetic analysis of nuclear ribosomal ITS/5.85 sequences in the tribe Millettieae (Fabaceae): Poecilanthe –Cyclolobium , the core Millettieae, and the Callerya group" . Syst Bot . 27 (4): 722–733. doi :10.1043/0363-6445-27.4.722 (inactive 1 November 2024). {{cite journal }}
: CS1 maint: DOI inactive as of November 2024 (link )
^ Cardoso D, de Queiroz LP, Pennington RT, de Lima HC, Fonty É, Wojciechowski MF, Lavin M (2012). "Revisiting the phylogeny of papilionoid legumes: new insights from comprehensively sampled early-branching lineages". Am J Bot . 99 (12): 1991–2013. doi :10.3732/ajb.1200380 . PMID 23221500 .
^ Wojciechowski MF, Lavin M, Sanderson MJ (2004). "A phylogeny of legumes (Leguminosae) based on analysis of the plastid matK gene resolves many well-supported subclades within the family" . Am J Bot . 91 (11): 1846–1862. doi :10.3732/ajb.91.11.1846 . PMID 21652332 .
^ Kajita T, Ohashi H, Takeishi Y, Bailey CD, Doyle JJ (2001). "RbcL and legume phylogeny, with particular reference to Phaseoleae, Millettieae, and allies" . Syst Bot . 26 (3): 515–536. doi :10.1043/0363-6445-26.3.515 (inactive 1 November 2024). {{cite journal }}
: CS1 maint: DOI inactive as of November 2024 (link )
^ a b Lavin M, Herendeen PS, Wojciechowski MF (2005). "Evolutionary rates analysis of Leguminosae implicates a rapid diversification of lineages during the tertiary" . Syst Biol . 54 (4): 575–94. doi :10.1080/10635150590947131 . PMID 16085576 .
^ Wink M, Mohamed GIA (2003). "Evolution of chemical defense traits in the Leguminosae: mapping of distribution patterns of secondary metabolites on a molecular phylogeny inferred from nucleotide sequences of the rbcL gene". Biochem Syst Ecol . 31 (8): 897–917. Bibcode :2003BioSE..31..897W . doi :10.1016/S0305-1978(03)00085-1 .